The Wire

  • New tunnel, premium RV section at Talladega Superspeedway on schedule despite weather

    Excerpt:

    Construction of a new oversized vehicle tunnel and premium RV infield parking section at Talladega Superspeedway is still on schedule to be completed in time for the April NASCAR race, despite large amounts of rainfall and unusual groundwater conditions underneath the track.

    Track Chairman Grant Lynch, during a news conference Wednesday at the track, said he’s amazed the general contractor, Taylor Corporation of Oxford, has been able to keep the project on schedule.

    “The amount of water they have pumped out of that and the extra engineering they did from the original design, basically to keep that tunnel from floating up out of the earth, was remarkable,” Lynch said.

  • Alabama workers built 1.6M engines in 2018 to add auto horsepower

    Excerpt:

    Alabama’s auto workers built nearly 1.6 million engines last year, as the state industry continues to carve out a place in global markets with innovative, high-performance parts, systems and finished vehicles.

    Last year also saw major new developments in engine manufacturing among the state’s key players, and more advanced infrastructure is on the way in the coming year.

    Hyundai expects to complete a key addition to its engine operations in Montgomery during the first half of 2019, while Honda continues to reap the benefits of a cutting-edge Alabama engine line installed several years ago.

  • Groundbreaking on Alabama’s newest aerospace plant made possible through key partnerships

    Excerpt:

    Political and business leaders gathered for a groundbreaking at Alabama’s newest aerospace plant gave credit to the formation of the many key partnerships that made it possible.

    Governor Kay Ivey and several other federal, state and local officials attended the event which celebrated the construction of rocket engine builder Blue Origin’s facility in Huntsville.

and 2 weeks ago

5 ways UAB researchers are studying COVID-19 in Alabama

(UAB/Contributed, YHN)

Back in March, UAB and community partners joined in creating a research battalion as part of the fight to end the COVID-19 pandemic.

The UAB School of Medicine and the Hugh Kaul Precision Medicine Institute asked its researchers to submit proposals to compete for emergency COVID-19 grant money—funding that was raised through UAB and generous business donors in Birmingham and Montgomery.

The result? Twenty-eight ongoing projects, funded by $1.4 million in support, are exploring how the virus works, what might be a potential treatment, how to provide better testing, and more.

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Here are five ways researchers are looking at the disease.

1. They’re honing in on the cytokine storm.

In the first clinical trial of its kind in the United States, UAB physicians are testing treatment to halt the potentially fatal out-of-control immune reaction known as cytokine storm syndrome, which occurs in some patients with COVID-19. Before the coronavirus crisis, Winn Chatham, M.D., and Randy Cron, M.D., Ph.D., were already in the middle of a clinical trial of the drug anakinra (rhIL–1Ra), designed for rheumatoid arthritis, as a treatment for cytokine storm syndrome in patients with herpes virus family infections, Still’s disease, and other conditions. Now, they’re seeing if it helps COVID-19 patients at UAB. Read the full story here.

2. They’re growing their own 3D human-tissue lung model.

To get a better understanding of COVID-19—particularly the immune reaction it provokes known as the cytokine storm—two researchers are using their own model of the human lung. Jessy Deshane, Ph.D., and Kayla Goliwas, Ph.D., have turned to tissue-engineered, 3D human models. They use small pieces of human tissue and keep them alive for weeks, during which time researchers can perform detailed experiments to get a better understanding of how COVID-19 develops and the cytokine storms it can trigger. Read the full story here.

3. They’re developing a glow-in-the-dark testing method for detecting COVID-19.

One of UAB’s newest hires hit the ground running with his research project. As a postdoc, Nicholas Lennemann, Ph.D., had developed a test that uses fluorescence to detect the presence of enteroviruses, which are so named because they are transmitted through the intestines. He already had plans to extend his study of this test. What if, he wondered, he could use it to find SARS-CoV-2? If it worked, it could pave the way for easier COVID-19 diagnoses. Read the full story here.

4. They’re figuring out how to detect the right antibodies.

Believe it or not, you probably already have had coronavirus. Not the coronavirus, as in SARS-CoV-2, the coronavirus that causes COVID-19—but OC43 and HKU1, two other members of the same beta-coronavirus family. “Twenty percent of what we call colds are caused by these two coronaviruses that circulate widely in humans,” says Troy Randall, Ph.D. So when you take an antibody test, how do you know the results are picking up the right antibodies? Randall and Frances Lund, Ph.D., want to answer this and other COVID-19 immunity questions. Read the full story here.

5. They’re getting seriously close to the virus itself.

Testing drugs on SARS-CoV-2 requires more than a few petri dishes. Kevin Harrod, Ph.D., UAB’s resident expert on SARS viruses, operates his lab at biosafety level 3, with scientists wearing full-body personal protective equipment (PPE) that include their own air supplies. UAB’s Precision Medicine Institute wanted to send Harrod drug candidates that might kill SARS-CoV-2. But before that, Harrod and his team had to figure out how to grow the virus. Read the full story here.

To learn more ways UAB researchers are fighting COVID-19, take a look at an overview of all the funded studies.

4 months ago

Tackling his third pandemic, UAB researcher gets up close with coronaviruses in order to kill them

(Lexi Coon/Contributed, YHN)

In early 2020, soon after it became clear that the COVID-19 pandemic was a serious threat to humanity, Kevin Harrod, Ph.D., the University of Alabama at Birmingham’s resident expert on SARS viruses, got a message from Matt Might, Ph.D., director of the university’s Precision Medicine Institute.

“If we computationally predict drugs, can you test them?” Might wanted to know. “I said ‘Sure,’” Harrod said.

Testing drugs on SARS-CoV-2, the novel coronavirus that causes COVID-19, requires more than a few petri dishes. Harrod’s lab operates at biosafety level 3, with scientists’ wearing full-body personal protective equipment that includes their own air supplies.

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“Just putting it on and taking it off is an adventure in itself,” said Harrod, professor in the Department of Anesthesiology and Perioperative Medicine. “You have to be especially careful when taking it off to not touch the outside. There’s a bit of a gymnastics aspect.”

This is Harrod’s third pandemic. During the first SARS outbreak in 2003, Harrod directed experimental model testing of candidate vaccines. Within three weeks of the first cases of H1N1 swine flu appearing in the United States in 2009, “we had the virus in my lab and NIH contracts to work on research,” he said. “I’ve been down this path before and know what it takes to get these things started.”

That is why Harrod received one of 14 pilot grants from the $1.1 million Urgent COVID-19 Clinical Research and Laboratory Research Fund, established by UAB through philanthropic giving and funding from Might’s Precision Medicine Institute. But the PMI is providing more than money, Harrod noted.

“This grant is really built on a team of computationalists who use artificial intelligence approaches to identify drugs that are already FDA-approved and can be repurposed,” he said. “Scientists will probably figure out whole new drugs to treat COVID-19, but that will take years.

This pandemic will probably be gone by then. We said, ‘What can we do now?’”

Harrod provides the biological validation of the drug candidates identified by the team from PMI. Before researchers can figure out how to kill SARS-CoV-2, Harrod and his team had to figure out how to grow it.

“Some viruses are hard to grow in the lab, but we had our practice with the first SARS 17 years ago,” he said. “We used many of the same methods, and lo and behold, they worked well.”

The onset of the COVID-19 pandemic caught Harrod between grants as he was building up to work on influenza. Adrie Steyn, Ph.D., professor in the Department of Microbiology, has a team working on tuberculosis, which also requires biosafety level 3 precautions.

“He said, ‘If you need people, my team is ready to help,’” Harrod said. “There has been a great deal of camaraderie and collaboration at the School of Medicine. Everyone is bringing their level of expertise to bear. That is one ancillary benefit of these tough times.”

In addition to supporting UAB research efforts, Harrod’s lab is serving the Biomedical Advanced Research and Development Authority, which is the federal agency charged with developing countermeasures against COVID-19.

“We’re providing the virology support,” Harrod said. “We grow the viruses, measure them and provide them to the BARDA contractor.”

Harrod has already begun to unleash compounds identified by PMI on viral cultures in the lab.

“We have a three-tier screen that we work through,” moving through a range of cell types, ending with human lung cells, he said.

Steven Rowe, M.D., professor and director of the Cystic Fibrosis Research Center at UAB, is working to develop animal models of COVID-19, something he has pioneered for cystic fibrosis. Rowe’s team is also growing the human lung cells that Harrod tests in his biocontainment lab.

“We have as many as 15 drugs that have been identified, and there are going to be candidates that are worthy of consideration” for human testing, Harrod said. “The beauty is these are all FDA-approved drugs so they could be mobilized really quickly.”

(Courtesy of UAB)

5 months ago

Convalescent plasma therapy is treating coronavirus patients in UAB research

(UAB/Contributed, YHN)

People who fight off COVID-19 carry a powerful memento in their blood: antibodies that are primed to wipe out the disease. By lending these trained immune soldiers to other patients, survivors might be able to knock out three cases of COVID for the price of one.

Antibody-rich blood plasma from people who have overcome COVID-19 is now helping to jumpstart immune defenses in patients struggling with the disease at UAB Hospital. Recently, UAB physicians treated three patients as part of an expanded-access clinical trial in collaboration with the Mayo Clinic, says Sonya Heath, M.D., professor of medicine in the Division of Infectious Diseases at the University of Alabama at Birmingham.

“The idea behind convalescent plasma is to take a donation from someone who had COVID-19 and recovered, and the immune response they developed may be able to help the patients who are treated with that plasma,” Heath said; she is the principal investigator at UAB for the study, which received expedited approval from the Food and Drug Administration in early April. Heath is working with Todd McCarty, M.D., assistant professor in the Division of Infectious Diseases, on the effort.

Could see benefit within 72 hours

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Patients who are potential candidates for the trial include anyone hospitalized with COVID-19 “who is not getting better,” Heath said. Symptoms include shortness of breath, fast respiratory rate and “showing signs they are declining in terms of their ability to oxygenate,” Heath said. “We believe that, the earlier we treat people, the more effective this will be.” She expects to see a benefit within about 72 hours of treatment’s beginning, Heath added.

Convalescent plasma therapy has proved effective during previous outbreaks of severe respiratory infections, including SARS in 2003, H1N1 in 2009 and MERS in 2012. There are indications that the experimental treatment works for COVID-19 as well. In early April, the journal Proceedings of the National Academies of Sciences published a small study from China, in which 10 adults with severe COVID-19 received the therapy. Within three days of their transfusions, the patients’ symptoms had improved rapidly. After a week, virus levels in the patients’ blood were undetectable and lung damage had improved. No severe adverse effects were reported.

The Mayo Clinic trial being conducted at UAB is not a placebo-controlled trial, Heath says.

“Everyone who enrolls gets plasma, and we are using this to treat patients with COVID-19 who are hospitalized on the floor or in ICU,” Heath said. “By contributing the clinical outcomes of all these patients along with other hospitals, we will be able to identify any benefit from this treatment, as well as any potential side effects, more quickly. Hopefully that will help us in the summer and fall, and next winter, be more specific with the way we use this potential treatment.”

Donors needed

The plasma that UAB has used comes from a local blood bank — the hospital has partnered with LifeSouth and the Red Cross.

“We put in requests for the blood samples we need to match to the patient,” Heath said. Just like typical blood transfusions, convalescent plasma must match the recipient’s blood type. The good news is that a single donation should be able to be used to treat two patients, Heath says.

“We have referred about eight to 10 COVID-recovered patients to our local blood banks with help from Audrey Lloyd, a UAB Infectious Disease fellow, and are working on expanding the supply of plasma to treat COVID patients,” Heath said. “But we need more donors.”

Donors must have a confirmed diagnosis of COVID-19 and have been symptom-free for 28 days.

“Most people who are interested in donating plasma will probably be eligible,” Heath said.

Two new studies starting soon — including convalescent plasma as prevention

Heath also is the principal investigator on two new convalescent plasma therapy studies that will open at UAB in the next few weeks. Both are in collaboration with Johns Hopkins University, she says.

“One is treatment of outpatients with COVID-19, and the other is trying to prevent COVID-19 in people who have been exposed,” she said. This “post-exposure prophylaxis” study, Heath said, “means you’ve been exposed to someone with COVID-19 for a long period of time — someone in your house, for example, and you haven’t been wearing a mask and are susceptible to getting COVID. We would treat you with the plasma in the hope this would prevent you from developing the symptoms related to COVID infection.”

The goal, Heath says, is to quickly enroll participants in both those studies. Although the studies will last for 12-16 months, “we will have pre-defined timepoints that allow us to look at the data along the way.”

Although convalescent plasma is a new idea to most people, “we have a long history of treating people with intravenous antibodies,” Heath said. “People in immunocompromised states often receive what is called IV IG — intravenous immunoglobulin. They are getting antibodies from other people to keep their immune systems strong. That has a long and safe history. This time, we’re just saying your immunoglobulin has to come from someone who has recovered from COVID-19, and that protection may be transferrable.”

Research leads the way

While Heath and McCarty treat patients in the hospital, Heath and a research collaborator are working in the lab to better understand the mechanisms involved. Randall Davis, M.D., professor in the UAB Division of Hematology and Oncology, is studying the quality of the donor’s antibody response as a factor in treatment success.

“The science that goes on behind the scenes in these types of clinical trials is very important,” Heath said. “That provides the building blocks we need as we are trying to understand how to make a vaccine or new therapies. As we learn more about these treatments, we can try to duplicate the best antibody response either through a vaccine or through COVID-specific monoclonal antibody development.”

“We want to do this work not only for our patients but also for the benefit of many more people,” Heath said. “We will be able to understand the benefits and risks and find answers much faster to improve the lives of those affected by COVID-19.”

(Courtesy of UAB)

5 months ago

In one of America’s rare undergraduate immunology programs, students are ‘preparing for the next pandemic’

(UAB/Contributed, YHN)

The entire planet, more or less, is fixated on the greatest pandemic in modern memory. Claire Elliott is already preparing for the next one.

Elliott, a junior from Franklin, Tennessee, is part of UAB’s Undergraduate Immunology Program, one of a handful of such programs at universities in the United States. In high school, where she was part of an International Baccalaureate program, “my biology teacher was extremely passionate about the immune system,” Elliott said. “I heard about the immunology program at UAB and absolutely loved it.”

Elliott, who plans to apply to an accelerated master’s program at UAB next year, hopes to pursue clinical research or a job in public health or epidemiology. She is part of the first cohort of students in the program, which launched in fall 2017 and is a collaboration between the School of Medicine and the College of Arts and Sciences.

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“I have been getting a lot of questions from friends and family because of COVID-19,” Elliott said. “Many of them don’t realize that a vaccine is not the same thing as a cure or treatment. I also have gotten a lot of questions about how the immune system works to protect you from diseases like COVID-19 and how to protect those more at risk.” Elliott’s classmate, Nour Moughnyeh, said “I’ve also been asked quite a bit about the structure of COVID-19 and if I can compare it to the flu so they can get a better understanding of the situation.”

The immune system is an elaborate network of molecules, cells and tissues that work together to defend the body against invading pathogens and disease.  Immunologists — including the renowned investigators at UAB — study this system. Students in the Undergraduate Immunology Program are required to spend a minimum of six credit hours in UAB’s labs, where they can select from positions with more than 100 UAB faculty who are pursuing cutting-edge research in immunology. Many students go far beyond that minimum requirement. Junior McKinley Williams has already “worked in multiple labs at UAB,” she said — first in pediatric infectious diseases research and now in the lab of Michael Seifert, M.D., a pediatric nephrologist in the UAB Department of Pediatrics and at Children’s of Alabama. “The project I am currently working on is a study of immunological rejection and other factors contributing to transplant failure in over 150 renal transplant patients,” she said.

On the front lines

“Immunology is — obviously given the circumstances — a very up-and-coming field and it is very exciting to be on the front lines of understanding such a complex science,” Williams said.

What is obvious now was not so clear a few months ago, when Louis Justement, Ph.D., co-director of the UIP and professor in the Department of Microbiology, and UAB colleagues wrote a paper in the journal Frontiers in Immunology calling for a revolution in the way immunology is taught. “Knowledge in the field of immunology is expanding rapidly, bolstering the need for increased time in the curriculum to facilitate the ability of educators to convey information so that it can be effectively understood and applied,” wrote Justement and his co-authors, Heather Bruns, Ph.D., and Jill Deaver. “We propose that it is time for a renaissance in immunology education at the undergraduate level to better prepare individuals who will subsequently pursue careers in medicine, related health professions, and biomedical research.”

The article was written before the novel coronavirus that causes COVID–19 emerged in China. But its recommendation resonates loudly in the midst of the ongoing pandemic. Today, the vast majority of potential immunologists really only encounter the field in any depth in professional or graduate school, Justement said. This is a far cry from the situation in neuroscience, which has taken off as an undergraduate major during the past several decades. That is one crucial reason why the pipeline of future immunologists — the experts who will design a new generation of vaccines, diagnostic tests and treatments for future pandemics — is relatively meager, Justement said.

“Studying the immune system is hard, and it can take some time before things start to click,” Elliott said. “We have amazing faculty who truly want us to thrive in our learning.”

A next generation for the next pandemic

“We hope to make a difference in creating the next generation of immunologists in health care and research for the next pandemic,” said Bruns, an associate professor in Microbiology. “We’re almost certainly going to be dealing with a pandemic again in our lifetimes. We’ve had three major coronavirus outbreaks in the past 20 years — SARS, MERS and now COVID–19.”

Immunology is a highly interdisciplinary field — a combination of cellular and molecular biology, genetics, biochemistry, physiology and anatomy — that touches every other major organ system and plays a major role in health and disease, Bruns said. In addition to tackling problems such as pandemic viral outbreaks, immunologists are also making ever greater contributions to the fights against cancer, allergies and asthma and efforts to expand organ transplantation to more patients.

Yet according to data that Bruns, Justement and Deaver gathered from the National Center for Educational Statistics, there were only 10 immunology-related majors offered in the United States in 2017–18 — most of them a combination of microbiology and immunology. By comparison, there were 210 undergraduate programs in neuroscience. (UAB’s Undergraduate Neuroscience Program, now a decade old, enrolls roughly 80 students per year, while the UIP brings in 20-25, Justement said.)

“We always say, ‘It’s tough to compete against those cool pictures of the brain,’” Bruns said. “A lymph node doesn’t look like much in comparison.”

Sharing what they know

But the COVID–19 pandemic has changed that. “We think it’s exciting to be an immunology major at any time, but certainly now,” Justement said. As the scale of the crisis in Wuhan, China emerged in January, Rodney King, Ph.D., an assistant professor in Microbiology, began to incorporate regular updates to his junior-level class on adaptive immunity. Bruns, who has joined King in teaching the class as it transitions to remote teaching, has started sending emails to her students that link the latest research papers and news articles to subjects they have covered in class. Justement, who teaches the freshman course on Current Topics in Immunology, is planning to add a focus on the therapeutic potential of using serum from convalescent patients to help those newly infected with COVID–19.

“We’re currently doing a journal analysis on immune responses to COVID-19 and potential vaccines,” Moughnyeh said. It has been fascinating to read about responses to the SARS and MERS pandemics and how “similar patterns are happening in this current pandemic,” she said.

When the students returned from an extended spring break to resume their formerly in-person classes online, Bruns said she was struck with how many had been able to use their training to help educate friends and family members.

“I have been getting lots of questions,” said J. Brandon Taylor Harris. “They’re often asking if the media is exaggerating claims being made about the virus’s ability to spread quickly or harm victims. They’re worried that the news is lying to them about the severity of the virus and that such widespread quarantine is overkill.” Friends and family also have questions about why older people are more vulnerable than other groups or ask for help in interpreting the results of studies and academic papers, he said.

“The current pandemic has strongly reinforced my decision to pursue a degree in immunology and shows how important this career is,” Harris said. He plans to earn a doctorate in immunology and become a researcher. “I’m leaning towards focusing on mucosal immunology and studying how being vaccinated against parasitic worms could prevent inflammatory diseases like irritable bowel syndrome, multiple sclerosis, asthma and autoimmunity,” Harris said. Moughnyeh, who plans to apply to optometry school, has been particularly intrigued by the effects of autoimmune diseases on the eyes. “I noticed most times the eye is affected in some way as a result of these diseases,” she said. “I got really passionate about wanting to advocate for eye care and really emphasize to people just how much about your overall health can be revealed through the health of your eyes.”

“We want people to realize that scientists are heroes — and immunologists are really important scientists,” Bruns said.

(Courtesy of UAB)